Multilevel Delayed Acceptance MCMC

نویسندگان

چکیده

We develop a novel Markov chain Monte Carlo (MCMC) method that exploits hierarchy of models increasing complexity to efficiently generate samples from an unnormalized target distribution. Broadly, the rewrites multilevel MCMC approach Dodwell et al. [SIAM/ASA J. Un-certain. Quantif., 3 (2015), pp. 1075–1108] in terms delayed acceptance Christen and Fox [J. Comput. Graph. Statist., 14 (2005), 795–810]. In particular, is extended use arbitrary depth allow subchains length. show algorithm satisfies detailed balance hence ergodic for Furthermore, variance reduction derived multiple levels subchains, adaptive correction coarse-level biases developed. Three numerical examples Bayesian inverse problems are presented demonstrate advantages these methods. The software available PyMC3.

برای دانلود باید عضویت طلایی داشته باشید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Delayed acceptance particle MCMC for exact inference in stochastic biochemical network models

Recently proposed particle MCMCmethods provide a flexible way of performing Bayesian inference for parameters governing stochastic kinetic models defined as Markov jump processes (MJPs). Each iteration of the scheme requires an estimate of the marginal likelihood calculated from the output of a sequential Monte Carlo scheme (also known as a particle filter). Consequently, the method can be extr...

متن کامل

Scaling analysis of delayed rejection MCMC methods

In this paper, we study the asymptotic efficiency of the delayed rejection strategy. In particular, the efficiency of the delayed rejection Metropolis-Hastings algorithm is compared to that of the regular Metropolis algorithm. To allow for a fair comparison, the study is carried under optimal mixing conditions for each of these algorithms. After introducing optimal scaling results for the delay...

متن کامل

Improving the Acceptance Rate of Reversible Jump Mcmc Proposals

Recent articles have commented on the difficulty of proposing efficient reversible jump moves within MCMC. We suggest a new way to make proposals more acceptable using a secondary Markov chain to modify proposed moves — at little extra programming cost.

متن کامل

Regulatory acceptance and use of 3R models: a multilevel perspective.

The importance placed on risk avoidance in our society has resulted in a broad range of regulations intended to guarantee safety of products such as pharmaceuticals and chemicals. Many of these regulations rely on animal tests. As a result, about 25% of the animal experiments in Europe are done for regulatory purposes. There are many initiatives that aim to replace, reduce, or refine laboratory...

متن کامل

MCMC Sampling for a Multilevel Model With Nonindependent Residuals Within and Between Cluster Units

In this article, we discuss the effect of removing the independence assumptions between the residuals in two-level random effect models. We first consider removing the independence between the Level 2 residuals and instead assume that the vector of all residuals at the cluster level follows a general multivariate normal distribution. We demonstrate how this assumption can allow us to fit higher...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: SIAM/ASA Journal on Uncertainty Quantification

سال: 2023

ISSN: ['2166-2525']

DOI: https://doi.org/10.1137/22m1476770